General functions

Methods

parsing.parse(filename, *[, a1, a2, mm1, ...])	Takes a 'filename' as input (fastq format), loops over the fastq using fastq_iterator and performs several checks to extract valid ITP sequences.
parsing.format_sequences(filename[, codons, ...])	Formats a nucleotide inverse toeprint file in a custom human-readable format
utils.itp_schematic(*[, codons, ...])	Creates a schematic of an iTP-Seq read with annotations and positions.